After finishing my PhD, I am now looking for a new exciting job, reach out!
Open source highlights
Dalted—Image-processing webapp in Rust.§ Geckopy—Python package for constraint-based metabolic modeling.¶ Rust SBML—Blazingly fast parser for SBML. Shu—Multi-dimensional, trans-omics metabolic maps, in Rust (native and WASM).†Lately working on
Kinetic model—Neural-embedded Bayesian kinetic description of C. autoethanogenum. Bayesian RNA ICA—Bayesian generative model of RNAseq, multi-omics and multi-strain. SSL—Self-Supervised Learning of biological sequences with vision transformers.About me
During my PhD, I worked in bacterial carbon capture with Bayesian Models, ML and SSL.
I am based in Denmark, open to work anywhere in the world, with preference in Europe. I like oyakodon and Romanian contemporary poetry.
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Here is my resume and my Linkedin.
¶Publication: Carrasco et al., 2023.
§Check the WASM counterpart.
†Publication: Carrasco et al., 2024.